diff options
| author | Fudgerboy <91767657+Fudgerboy@users.noreply.github.com> | 2024-05-06 06:49:57 +0000 |
|---|---|---|
| committer | Fudgerboy <91767657+Fudgerboy@users.noreply.github.com> | 2024-05-06 06:49:57 +0000 |
| commit | 59473b1611c4d81771dd96d24dbc4a501d60ffea (patch) | |
| tree | 644ea9263d27b89b8591400792d254be41a0b0cb /wk6/pset/dna | |
| parent | f64dac2305821e4975f40fa8791ecf021588e7ad (diff) | |
Sun, May 5, 2024, 11:49 PM -07:00
Diffstat (limited to 'wk6/pset/dna')
| -rw-r--r-- | wk6/pset/dna/dna.py | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/wk6/pset/dna/dna.py b/wk6/pset/dna/dna.py index 9276008..3199f73 100644 --- a/wk6/pset/dna/dna.py +++ b/wk6/pset/dna/dna.py @@ -19,19 +19,19 @@ def main(): # TODO: Read database file into a variable rows = [] - with open(sys.argv[0]) as file: + with open(sys.argv[1]) as file: reader = csv.DictReader(file) for row in reader: rows.append(row) # TODO: Read DNA sequence file into a variable - database = '' + sys.argv[1] + database = 'databases/' + sys.argv[2] sequence = '' - with open(sys.argv[1]) as file: + with open(database) as file: sequence = sequence.join(file.readlines()) # TODO: Find longest match of each STR in DNA sequence - str1 = rows[0][2] + str1 = rows[0] print(str1) # TODO: Check database for matching profiles |