diff options
Diffstat (limited to 'wk6/pset/dna')
| -rw-r--r-- | wk6/pset/dna/dna.py | 7 |
1 files changed, 4 insertions, 3 deletions
diff --git a/wk6/pset/dna/dna.py b/wk6/pset/dna/dna.py index 3199f73..b6955f7 100644 --- a/wk6/pset/dna/dna.py +++ b/wk6/pset/dna/dna.py @@ -18,16 +18,17 @@ def main(): # return # TODO: Read database file into a variable + database = 'databases/' + sys.argv[1] rows = [] - with open(sys.argv[1]) as file: + with open(database) as file: reader = csv.DictReader(file) for row in reader: rows.append(row) # TODO: Read DNA sequence file into a variable - database = 'databases/' + sys.argv[2] + text = 'sequences/' + sys.argv[2] sequence = '' - with open(database) as file: + with open(text) as file: sequence = sequence.join(file.readlines()) # TODO: Find longest match of each STR in DNA sequence |