From 1007603cd53c466b7bf48020b2cb395f60e9365a Mon Sep 17 00:00:00 2001 From: Fudgerboy <91767657+Fudgerboy@users.noreply.github.com> Date: Mon, 6 May 2024 06:51:29 +0000 Subject: Sun, May 5, 2024, 11:51 PM -07:00 --- wk6/pset/dna/dna.py | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/wk6/pset/dna/dna.py b/wk6/pset/dna/dna.py index 3199f73..b6955f7 100644 --- a/wk6/pset/dna/dna.py +++ b/wk6/pset/dna/dna.py @@ -18,16 +18,17 @@ def main(): # return # TODO: Read database file into a variable + database = 'databases/' + sys.argv[1] rows = [] - with open(sys.argv[1]) as file: + with open(database) as file: reader = csv.DictReader(file) for row in reader: rows.append(row) # TODO: Read DNA sequence file into a variable - database = 'databases/' + sys.argv[2] + text = 'sequences/' + sys.argv[2] sequence = '' - with open(database) as file: + with open(text) as file: sequence = sequence.join(file.readlines()) # TODO: Find longest match of each STR in DNA sequence -- cgit v1.2.3